STRINGSTRING
MDS_0249 MDS_0249 MDS_4618 MDS_4618 MDS_2807 MDS_2807 MDS_1702 MDS_1702 MDS_0233 MDS_0233 MDS_4487 MDS_4487 MDS_3465 MDS_3465 MDS_0815 MDS_0815 MDS_3829 MDS_3829 MDS_0725 MDS_0725 MDS_2718 MDS_2718
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0249EAL domain-containing protein. (265 aa)    
Predicted Functional Partners:
MDS_4618
Diguanylate cyclase with PAS/PAC sensor.
 
 0.885
MDS_2807
Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor.
 
 0.884
MDS_1702
Diguanylate cyclase with PAS/PAC sensor.
 
 0.852
MDS_0233
Diguanylate cyclase with PAS/PAC sensor.
 
 0.850
MDS_4487
Diguanylate cyclase.
  
 0.845
MDS_3465
Diguanylate cyclase.
  
 0.844
MDS_0815
Diguanylate cyclase.
  
 0.836
MDS_3829
Cyclic nucleotide-binding protein.
 
 
 0.828
MDS_0725
Diguanylate cyclase.
  
 0.826
MDS_2718
Diguanylate cyclase.
  
 0.826
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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