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aguA aguA aguB aguB speA speA MDS_2221 MDS_2221 MDS_0832 MDS_0832 MDS_4033 MDS_4033 MDS_0398 MDS_0398 MDS_2748 MDS_2748 arcC arcC MDS_1292 MDS_1292
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
aguAAgmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. (365 aa)    
Predicted Functional Partners:
aguB
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
 
 0.998
speA
Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine.
 
  
 0.952
MDS_2221
Lysine decarboxylase.
    
 0.934
MDS_0832
Amidohydrolase.
 
  
 0.687
MDS_4033
Hydrophobe/amphiphile efflux-1 (HAE1) family protein.
   
    0.535
MDS_0398
TetR family transcriptional regulator.
     
 0.533
MDS_2748
IclR family transcriptional regulator.
   
    0.523
arcC
Carbamate kinase; Belongs to the carbamate kinase family.
 
  
 0.511
MDS_1292
Aldo/keto reductase.
   
    0.402
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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