Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0404 | MDS_0405 | MDS_0404 | MDS_0405 | Extracellular solute-binding protein. | Extracellular solute-binding protein. | 0.962 |
MDS_0404 | MDS_0407 | MDS_0404 | MDS_0407 | Extracellular solute-binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.984 |
MDS_0404 | MDS_0408 | MDS_0404 | MDS_0408 | Extracellular solute-binding protein. | Ornithine carbamoyltransferase. | 0.991 |
MDS_0404 | MDS_4338 | MDS_0404 | MDS_4338 | Extracellular solute-binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.872 |
MDS_0404 | MDS_4339 | MDS_0404 | MDS_4339 | Extracellular solute-binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.780 |
MDS_0404 | MDS_4523 | MDS_0404 | MDS_4523 | Extracellular solute-binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.826 |
MDS_0404 | MDS_4524 | MDS_0404 | MDS_4524 | Extracellular solute-binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.875 |
MDS_0404 | MDS_4656 | MDS_0404 | MDS_4656 | Extracellular solute-binding protein. | Ornithine carbamoyltransferase. | 0.940 |
MDS_0404 | MDS_4657 | MDS_0404 | MDS_4657 | Extracellular solute-binding protein. | Polyamine ABC transporter permease PotB. | 0.869 |
MDS_0404 | potA | MDS_0404 | MDS_0406 | Extracellular solute-binding protein. | Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.991 |
MDS_0405 | MDS_0404 | MDS_0405 | MDS_0404 | Extracellular solute-binding protein. | Extracellular solute-binding protein. | 0.962 |
MDS_0405 | MDS_0407 | MDS_0405 | MDS_0407 | Extracellular solute-binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.991 |
MDS_0405 | MDS_0408 | MDS_0405 | MDS_0408 | Extracellular solute-binding protein. | Ornithine carbamoyltransferase. | 0.991 |
MDS_0405 | MDS_4338 | MDS_0405 | MDS_4338 | Extracellular solute-binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.857 |
MDS_0405 | MDS_4339 | MDS_0405 | MDS_4339 | Extracellular solute-binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.774 |
MDS_0405 | MDS_4523 | MDS_0405 | MDS_4523 | Extracellular solute-binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.822 |
MDS_0405 | MDS_4524 | MDS_0405 | MDS_4524 | Extracellular solute-binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.886 |
MDS_0405 | MDS_4656 | MDS_0405 | MDS_4656 | Extracellular solute-binding protein. | Ornithine carbamoyltransferase. | 0.942 |
MDS_0405 | MDS_4657 | MDS_0405 | MDS_4657 | Extracellular solute-binding protein. | Polyamine ABC transporter permease PotB. | 0.876 |
MDS_0405 | potA | MDS_0405 | MDS_0406 | Extracellular solute-binding protein. | Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.995 |
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