STRINGSTRING
MDS_0429 MDS_0429 MDS_0430 MDS_0430 MDS_0431 MDS_0431 MDS_0432 MDS_0432 MDS_0433 MDS_0433 MDS_0221 MDS_0221 flgC flgC ribD ribD MDS_1459 MDS_1459
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0429Hypothetical protein. (199 aa)    
Predicted Functional Partners:
MDS_0430
Hypothetical protein.
 
   0.969
MDS_0431
ABC transporter related protein.
 
    0.960
MDS_0432
Hypothetical protein.
 
  
 0.951
MDS_0433
Flavoprotein involved in K+ transport-like protein.
       0.537
MDS_0221
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.468
flgC
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.468
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.427
MDS_1459
Putative lipoprotein.
  
     0.414
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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