STRINGSTRING
MDS_0433 MDS_0433 MDS_1792 MDS_1792 MDS_2085 MDS_2085 MDS_3955 MDS_3955 MDS_3161 MDS_3161 MDS_2088 MDS_2088 MDS_3659 MDS_3659 MDS_3230 MDS_3230 atpA atpA MDS_0429 MDS_0429 MDS_0430 MDS_0430
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0433Flavoprotein involved in K+ transport-like protein. (493 aa)    
Predicted Functional Partners:
MDS_1792
Amino acid adenylation domain-containing protein.
  
  
 0.758
MDS_2085
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.691
MDS_3955
Metal-dependent hydrolase-like protein.
 
     0.663
MDS_3161
Alpha/beta hydrolase fold protein.
 
 0.627
MDS_2088
Metal-dependent hydrolase-like protein.
 
     0.620
MDS_3659
Alpha/beta hydrolase fold protein.
 
 
 0.565
MDS_3230
Hypothetical protein.
  
    0.548
atpA
F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
   0.541
MDS_0429
Hypothetical protein.
       0.537
MDS_0430
Hypothetical protein.
       0.537
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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