Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0429 | MDS_0430 | MDS_0429 | MDS_0430 | Hypothetical protein. | Hypothetical protein. | 0.969 |
MDS_0429 | MDS_0433 | MDS_0429 | MDS_0433 | Hypothetical protein. | Flavoprotein involved in K+ transport-like protein. | 0.537 |
MDS_0430 | MDS_0429 | MDS_0430 | MDS_0429 | Hypothetical protein. | Hypothetical protein. | 0.969 |
MDS_0430 | MDS_0433 | MDS_0430 | MDS_0433 | Hypothetical protein. | Flavoprotein involved in K+ transport-like protein. | 0.537 |
MDS_0433 | MDS_0429 | MDS_0433 | MDS_0429 | Flavoprotein involved in K+ transport-like protein. | Hypothetical protein. | 0.537 |
MDS_0433 | MDS_0430 | MDS_0433 | MDS_0430 | Flavoprotein involved in K+ transport-like protein. | Hypothetical protein. | 0.537 |
MDS_0433 | MDS_1792 | MDS_0433 | MDS_1792 | Flavoprotein involved in K+ transport-like protein. | Amino acid adenylation domain-containing protein. | 0.758 |
MDS_0433 | MDS_2085 | MDS_0433 | MDS_2085 | Flavoprotein involved in K+ transport-like protein. | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.691 |
MDS_0433 | MDS_2088 | MDS_0433 | MDS_2088 | Flavoprotein involved in K+ transport-like protein. | Metal-dependent hydrolase-like protein. | 0.620 |
MDS_0433 | MDS_3161 | MDS_0433 | MDS_3161 | Flavoprotein involved in K+ transport-like protein. | Alpha/beta hydrolase fold protein. | 0.627 |
MDS_0433 | MDS_3230 | MDS_0433 | MDS_3230 | Flavoprotein involved in K+ transport-like protein. | Hypothetical protein. | 0.548 |
MDS_0433 | MDS_3659 | MDS_0433 | MDS_3659 | Flavoprotein involved in K+ transport-like protein. | Alpha/beta hydrolase fold protein. | 0.565 |
MDS_0433 | MDS_3955 | MDS_0433 | MDS_3955 | Flavoprotein involved in K+ transport-like protein. | Metal-dependent hydrolase-like protein. | 0.663 |
MDS_0433 | atpA | MDS_0433 | MDS_4944 | Flavoprotein involved in K+ transport-like protein. | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.541 |
MDS_1792 | MDS_0433 | MDS_1792 | MDS_0433 | Amino acid adenylation domain-containing protein. | Flavoprotein involved in K+ transport-like protein. | 0.758 |
MDS_1792 | MDS_2085 | MDS_1792 | MDS_2085 | Amino acid adenylation domain-containing protein. | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.730 |
MDS_1792 | MDS_3161 | MDS_1792 | MDS_3161 | Amino acid adenylation domain-containing protein. | Alpha/beta hydrolase fold protein. | 0.794 |
MDS_1792 | MDS_3659 | MDS_1792 | MDS_3659 | Amino acid adenylation domain-containing protein. | Alpha/beta hydrolase fold protein. | 0.921 |
MDS_1792 | atpA | MDS_1792 | MDS_4944 | Amino acid adenylation domain-containing protein. | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.681 |
MDS_2085 | MDS_0433 | MDS_2085 | MDS_0433 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Flavoprotein involved in K+ transport-like protein. | 0.691 |
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