STRINGSTRING
MDS_0469 MDS_0469 MDS_0467 MDS_0467 MDS_0465 MDS_0465 walR walR pleD_11 pleD_11 MDS_0464 MDS_0464 MDS_0468 MDS_0468 MDS_0466 MDS_0466 MDS_2223 MDS_2223 MDS_0693 MDS_0693 MDS_2240 MDS_2240
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0469Putative CheW protein. (156 aa)    
Predicted Functional Partners:
MDS_0467
CheA signal transduction histidine kinase.
 
 
 0.993
MDS_0465
Methyl-accepting chemotaxis sensory transducer.
 
  
 0.981
walR
Response regulator receiver protein.
 
  
 0.980
pleD_11
Response regulator receiver protein.
 
  
 0.975
MDS_0464
Putative CheW protein.
 
  
  0.970
MDS_0468
CheB methylesterase.
 
  
 0.907
MDS_0466
Protein-glutamate O-methyltransferase.
 
  
 0.841
MDS_2223
Hypothetical protein.
  
   
 0.797
MDS_0693
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
  
     0.761
MDS_2240
Hypothetical protein.
  
     0.757
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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