Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0451 | MDS_0477 | MDS_0451 | MDS_0477 | HAD family hydrolase. | Hypothetical protein. | 0.913 |
MDS_0451 | MDS_1089 | MDS_0451 | MDS_1089 | HAD family hydrolase. | Metallophosphoesterase; Belongs to the 5'-nucleotidase family. | 0.913 |
MDS_0451 | MDS_2367 | MDS_0451 | MDS_2367 | HAD family hydrolase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.901 |
MDS_0451 | adk | MDS_0451 | MDS_3686 | HAD family hydrolase. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.905 |
MDS_0451 | amn | MDS_0451 | MDS_4068 | HAD family hydrolase. | AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations. | 0.910 |
MDS_0451 | apt | MDS_0451 | MDS_2090 | HAD family hydrolase. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.906 |
MDS_0451 | cmk | MDS_0451 | MDS_1959 | HAD family hydrolase. | Cytidylate kinase. | 0.900 |
MDS_0451 | cpdA | MDS_0451 | MDS_0679 | HAD family hydrolase. | Calcineurin phosphoesterase C-terminal domain-containing protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. | 0.902 |
MDS_0451 | surE | MDS_0451 | MDS_3301 | HAD family hydrolase. | Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.919 |
MDS_0477 | MDS_0451 | MDS_0477 | MDS_0451 | Hypothetical protein. | HAD family hydrolase. | 0.913 |
MDS_0477 | MDS_1089 | MDS_0477 | MDS_1089 | Hypothetical protein. | Metallophosphoesterase; Belongs to the 5'-nucleotidase family. | 0.900 |
MDS_0477 | MDS_1548 | MDS_0477 | MDS_1548 | Hypothetical protein. | Cytosine deaminase. | 0.902 |
MDS_0477 | MDS_2367 | MDS_0477 | MDS_2367 | Hypothetical protein. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.905 |
MDS_0477 | adk | MDS_0477 | MDS_3686 | Hypothetical protein. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.902 |
MDS_0477 | amn | MDS_0477 | MDS_4068 | Hypothetical protein. | AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations. | 0.915 |
MDS_0477 | apt | MDS_0477 | MDS_2090 | Hypothetical protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.906 |
MDS_0477 | cmk | MDS_0477 | MDS_1959 | Hypothetical protein. | Cytidylate kinase. | 0.900 |
MDS_0477 | cpdA | MDS_0477 | MDS_0679 | Hypothetical protein. | Calcineurin phosphoesterase C-terminal domain-containing protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. | 0.902 |
MDS_0477 | surE | MDS_0477 | MDS_3301 | Hypothetical protein. | Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.908 |
MDS_1089 | MDS_0451 | MDS_1089 | MDS_0451 | Metallophosphoesterase; Belongs to the 5'-nucleotidase family. | HAD family hydrolase. | 0.913 |
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