STRINGSTRING
MDS_0506 MDS_0506 MDS_0507 MDS_0507 MDS_0508 MDS_0508 MDS_1588 MDS_1588 yccS yccS MDS_1172 MDS_1172 MDS_1792 MDS_1792 MDS_1060 MDS_1060 MDS_4388 MDS_4388 MDS_0504 MDS_0504 ald ald
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0506Transcriptional regulatory protein, TetR family. (179 aa)    
Predicted Functional Partners:
MDS_0507
Glutathione S-transferase-like protein.
       0.631
MDS_0508
Glutathione S-transferase-like protein; Belongs to the GST superfamily.
       0.610
MDS_1588
Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.588
yccS
YccS/YhfK family integral membrane protein.
  
    0.545
MDS_1172
NADH:flavin oxidoreductase/NADH oxidase.
 
  
 0.521
MDS_1792
Amino acid adenylation domain-containing protein.
     
 0.494
MDS_1060
NADH:flavin oxidoreductase/NADH oxidase.
  
  
 0.457
MDS_4388
TetR family transcriptional regulator.
  
   
 0.441
MDS_0504
Diguanylate cyclase.
   
   0.434
ald
L-alanine dehydrogenase; Belongs to the AlaDH/PNT family.
       0.432
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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