STRINGSTRING
MDS_0512 MDS_0512 MDS_0332 MDS_0332 MDS_0772 MDS_0772 MDS_3507 MDS_3507 MDS_4583 MDS_4583 MDS_2694 MDS_2694 MDS_4581 MDS_4581 MDS_4582 MDS_4582 MDS_3803 MDS_3803 MDS_0511 MDS_0511 MDS_4234 MDS_4234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0512Extracellular solute-binding protein. (243 aa)    
Predicted Functional Partners:
MDS_0332
Putative lipoprotein.
  
     0.759
MDS_0772
Extracellular solute-binding protein.
  
     0.752
MDS_3507
Hypothetical protein.
  
     0.748
MDS_4583
Amino acid ABC transporter periplasmic protein.
  
     0.700
MDS_2694
Amino acid ABC transporter periplasmic protein.
  
     0.674
MDS_4581
Extracellular solute-binding protein.
  
     0.665
MDS_4582
Amino acid ABC transporter periplasmic protein.
  
     0.625
MDS_3803
Hypothetical protein.
  
     0.563
MDS_0511
Hypothetical protein.
  
    0.552
MDS_4234
Hypothetical protein.
  
     0.539
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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