STRINGSTRING
MDS_0534 MDS_0534 MDS_0535 MDS_0535 MDS_0532 MDS_0532 MDS_0529 MDS_0529 MDS_4456 MDS_4456 MDS_4447 MDS_4447 MDS_4449 MDS_4449 MDS_4455 MDS_4455 MDS_4450 MDS_4450 MDS_0531 MDS_0531 fdhA fdhA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0534Hypothetical protein. (176 aa)    
Predicted Functional Partners:
MDS_0535
Membrane dipeptidase.
 
  
 0.983
MDS_0532
Putative FMN oxidoreductase.
 
  
 0.979
MDS_0529
Electron transfer flavoprotein beta-subunit.
 
    0.953
MDS_4456
Rieske (2Fe-2S) domain-containing protein.
 
    0.949
MDS_4447
Sarcosine oxidase gamma subunit family protein.
 
    0.946
MDS_4449
Sarcosine oxidase delta subunit family protein.
 
    0.937
MDS_4455
Oxidoreductase FAD-binding subunit.
 
    0.926
MDS_4450
Sarcosine oxidase beta subunit family protein.
  
    0.906
MDS_0531
Hypothetical protein.
 
  
 0.900
fdhA
Alcohol dehydrogenase.
  
  
 0.897
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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