STRINGSTRING
MDS_0545 MDS_0545 MDS_0564 MDS_0564 MDS_1811 MDS_1811 MDS_3859 MDS_3859 MDS_3877 MDS_3877 MDS_4345 MDS_4345 MDS_1117 MDS_1117 MDS_3254 MDS_3254 MDS_1699 MDS_1699 MDS_0563 MDS_0563 MDS_1075 MDS_1075
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0545Esterase EstA. (614 aa)    
Predicted Functional Partners:
MDS_0564
Poly(hydroxyalkanoate) granule-associated protein.
  
   
 0.680
MDS_1811
Type IV pilus assembly PilZ.
  
     0.661
MDS_3859
Hypothetical protein.
  
     0.643
MDS_3877
TfoX domain-containing protein.
  
     0.628
MDS_4345
Hypothetical protein.
  
     0.626
MDS_1117
TPR repeat-containing protein.
  
 
 0.608
MDS_3254
Hypothetical protein.
  
 
 0.602
MDS_1699
Peptidase S8/S53 subtilisin kexin sedolisin.
 
   
 0.586
MDS_0563
Poly(hydroxyalkanoate) granule-associated protein.
  
     0.585
MDS_1075
poly(beta-D-mannuronate) lyase.
 
  
 0.583
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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