STRINGSTRING
MDS_0638 MDS_0638 MDS_0637 MDS_0637 MDS_0639 MDS_0639 selO selO MDS_0635 MDS_0635 MDS_0070 MDS_0070 MDS_0089 MDS_0089 MDS_0640 MDS_0640 MDS_1488 MDS_1488 MDS_1498 MDS_1498
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0638cvrA, nhaP2, ycgO. (581 aa)    
Predicted Functional Partners:
MDS_0637
Potassium efflux protein KefA.
 
   
 0.641
MDS_0639
acyl-CoA dehydrogenase domain-containing protein.
       0.551
selO
Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.
       0.550
MDS_0635
Citrate transporter.
 
   
 0.469
MDS_0070
Potassium transporter peripheral membrane component.
 
   
 0.458
MDS_0089
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.426
MDS_0640
2-nitropropane dioxygenase, NPD.
       0.407
MDS_1488
NADH dehydrogenase (quinone).
      
 0.403
MDS_1498
Putative monovalent cation/H+ antiporter subunit A.
      
 0.403
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.