STRINGSTRING
MDS_0655 MDS_0655 MDS_0654 MDS_0654 MDS_0653 MDS_0653 waaF waaF MDS_0658 MDS_0658 MDS_0657 MDS_0657 MDS_0685 MDS_0685 MDS_0659 MDS_0659 MDS_2287 MDS_2287 MDS_3991 MDS_3991 MDS_0663 MDS_0663
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
MDS_0655Lipopolysaccharide kinase; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family. (268 aa)    
Predicted Functional Partners:
MDS_0654
Glycosyl transferase, group 1.
 
 
 0.997
MDS_0653
Lipopolysaccharide heptosyltransferase I.
 
 
 0.992
waaF
Lipopolysaccharide heptosyltransferase II.
 
 
 0.989
MDS_0658
Hypothetical protein.
 
 
 0.949
MDS_0657
Lipopolysaccharide kinase.
 
 
 0.927
MDS_0685
3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
    
 0.915
MDS_0659
Carbamoyltransferase.
 
  
 0.870
MDS_2287
Lipopolysaccharide kinase.
 
 
 0.852
MDS_3991
Mn2+-dependent serine/threonine protein kinase.
 
 
 0.852
MDS_0663
Hypothetical protein.
 
     0.817
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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