STRINGSTRING
MDS_0660 MDS_0660 MDS_0657 MDS_0657 MDS_0658 MDS_0658 MDS_0663 MDS_0663 MDS_0659 MDS_0659 MDS_0664 MDS_0664 MDS_0656 MDS_0656 MDS_0654 MDS_0654 MDS_0661 MDS_0661 MDS_0665 MDS_0665 MDS_0655 MDS_0655
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0660Glycosyl transferase, group 1. (377 aa)    
Predicted Functional Partners:
MDS_0657
Lipopolysaccharide kinase.
 
 
 0.920
MDS_0658
Hypothetical protein.
 
 
 0.912
MDS_0663
Hypothetical protein.
 
     0.902
MDS_0659
Carbamoyltransferase.
 
   
 0.901
MDS_0664
Hypothetical protein.
 
   
 0.899
MDS_0656
Lipopolysaccharide kinase.
  
 
 0.785
MDS_0654
Glycosyl transferase, group 1.
 
     0.779
MDS_0661
Putative acetyltransferase.
  
  
 0.728
MDS_0665
Hypothetical protein.
  
  
 0.723
MDS_0655
Lipopolysaccharide kinase; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
 
     0.700
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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