Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0694 | MDS_0696 | MDS_0694 | MDS_0696 | Hypothetical protein. | Rhodanese domain-containing protein. | 0.505 |
MDS_0694 | psd | MDS_0694 | MDS_0695 | Hypothetical protein. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.527 |
MDS_0696 | MDS_0694 | MDS_0696 | MDS_0694 | Rhodanese domain-containing protein. | Hypothetical protein. | 0.505 |
MDS_0696 | MDS_0697 | MDS_0696 | MDS_0697 | Rhodanese domain-containing protein. | HdoD. | 0.751 |
MDS_0696 | MDS_1792 | MDS_0696 | MDS_1792 | Rhodanese domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.429 |
MDS_0696 | psd | MDS_0696 | MDS_0695 | Rhodanese domain-containing protein. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.683 |
MDS_0697 | MDS_0696 | MDS_0697 | MDS_0696 | HdoD. | Rhodanese domain-containing protein. | 0.751 |
MDS_0697 | psd | MDS_0697 | MDS_0695 | HdoD. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.646 |
MDS_1792 | MDS_0696 | MDS_1792 | MDS_0696 | Amino acid adenylation domain-containing protein. | Rhodanese domain-containing protein. | 0.429 |
MDS_1792 | MDS_2258 | MDS_1792 | MDS_2258 | Amino acid adenylation domain-containing protein. | Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.704 |
MDS_1792 | MDS_3699 | MDS_1792 | MDS_3699 | Amino acid adenylation domain-containing protein. | Glucose-methanol-choline oxidoreductase. | 0.686 |
MDS_1792 | betA | MDS_1792 | MDS_0516 | Amino acid adenylation domain-containing protein. | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | 0.686 |
MDS_1792 | pgsA | MDS_1792 | MDS_2397 | Amino acid adenylation domain-containing protein. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.574 |
MDS_1792 | psd | MDS_1792 | MDS_0695 | Amino acid adenylation domain-containing protein. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.513 |
MDS_2258 | MDS_1792 | MDS_2258 | MDS_1792 | Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | Amino acid adenylation domain-containing protein. | 0.704 |
MDS_2258 | psd | MDS_2258 | MDS_0695 | Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.566 |
MDS_3699 | MDS_1792 | MDS_3699 | MDS_1792 | Glucose-methanol-choline oxidoreductase. | Amino acid adenylation domain-containing protein. | 0.686 |
MDS_3699 | betA | MDS_3699 | MDS_0516 | Glucose-methanol-choline oxidoreductase. | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | 0.912 |
MDS_3699 | psd | MDS_3699 | MDS_0695 | Glucose-methanol-choline oxidoreductase. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.803 |
betA | MDS_1792 | MDS_0516 | MDS_1792 | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | Amino acid adenylation domain-containing protein. | 0.686 |
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