STRINGSTRING
MDS_0764 MDS_0764 MDS_0763 MDS_0763 MDS_0762 MDS_0762 MDS_0761 MDS_0761 MDS_0117 MDS_0117 MDS_4063 MDS_4063 MDS_2843 MDS_2843 MDS_3305 MDS_3305 glgA glgA MDS_0759 MDS_0759 MDS_0760 MDS_0760
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0764Iron-containing alcohol dehydrogenase. (389 aa)    
Predicted Functional Partners:
MDS_0763
Aldehyde dehydrogenase.
 
 0.913
MDS_0762
L-glutamine synthetase.
 
   
 0.762
MDS_0761
TRAP dicarboxylate transporter-DctP subunit.
 
    0.619
MDS_0117
Alcohol dehydrogenase.
  
 
 0.579
MDS_4063
Alcohol dehydrogenase.
  
 
 0.579
MDS_2843
Class III alcohol dehydrogenase.
   
 
 0.559
MDS_3305
Alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 
 0.559
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.535
MDS_0759
Tripartite ATP-independent periplasmic transporter DctQ.
 
   
 0.520
MDS_0760
TRAP C4-dicarboxylate transport system permease DctM subunit.
 
   
 0.507
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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