Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0637 | MDS_0790 | MDS_0637 | MDS_0790 | Potassium efflux protein KefA. | Multiple antibiotic resistance (MarC)-related protein. | 0.441 |
MDS_0788 | MDS_0790 | MDS_0788 | MDS_0790 | GntR family transcriptional regulator. | Multiple antibiotic resistance (MarC)-related protein. | 0.426 |
MDS_0788 | atzF | MDS_0788 | MDS_0789 | GntR family transcriptional regulator. | Allophanate hydrolase. | 0.902 |
MDS_0788 | urtA | MDS_0788 | MDS_0787 | GntR family transcriptional regulator. | ABC-type branched-chain amino acid transport systems periplasmic component-like protein. | 0.720 |
MDS_0790 | MDS_0637 | MDS_0790 | MDS_0637 | Multiple antibiotic resistance (MarC)-related protein. | Potassium efflux protein KefA. | 0.441 |
MDS_0790 | MDS_0788 | MDS_0790 | MDS_0788 | Multiple antibiotic resistance (MarC)-related protein. | GntR family transcriptional regulator. | 0.426 |
MDS_0790 | MDS_0791 | MDS_0790 | MDS_0791 | Multiple antibiotic resistance (MarC)-related protein. | Integral membrane sensor hybrid histidine kinase. | 0.667 |
MDS_0790 | atzF | MDS_0790 | MDS_0789 | Multiple antibiotic resistance (MarC)-related protein. | Allophanate hydrolase. | 0.483 |
MDS_0790 | purD | MDS_0790 | MDS_0792 | Multiple antibiotic resistance (MarC)-related protein. | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | 0.484 |
MDS_0790 | urtA | MDS_0790 | MDS_0787 | Multiple antibiotic resistance (MarC)-related protein. | ABC-type branched-chain amino acid transport systems periplasmic component-like protein. | 0.429 |
MDS_0791 | MDS_0790 | MDS_0791 | MDS_0790 | Integral membrane sensor hybrid histidine kinase. | Multiple antibiotic resistance (MarC)-related protein. | 0.667 |
MDS_0791 | atzF | MDS_0791 | MDS_0789 | Integral membrane sensor hybrid histidine kinase. | Allophanate hydrolase. | 0.408 |
MDS_0791 | purD | MDS_0791 | MDS_0792 | Integral membrane sensor hybrid histidine kinase. | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | 0.610 |
atzF | MDS_0788 | MDS_0789 | MDS_0788 | Allophanate hydrolase. | GntR family transcriptional regulator. | 0.902 |
atzF | MDS_0790 | MDS_0789 | MDS_0790 | Allophanate hydrolase. | Multiple antibiotic resistance (MarC)-related protein. | 0.483 |
atzF | MDS_0791 | MDS_0789 | MDS_0791 | Allophanate hydrolase. | Integral membrane sensor hybrid histidine kinase. | 0.408 |
atzF | urtA | MDS_0789 | MDS_0787 | Allophanate hydrolase. | ABC-type branched-chain amino acid transport systems periplasmic component-like protein. | 0.756 |
purD | MDS_0790 | MDS_0792 | MDS_0790 | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | Multiple antibiotic resistance (MarC)-related protein. | 0.484 |
purD | MDS_0791 | MDS_0792 | MDS_0791 | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | Integral membrane sensor hybrid histidine kinase. | 0.610 |
urtA | MDS_0788 | MDS_0787 | MDS_0788 | ABC-type branched-chain amino acid transport systems periplasmic component-like protein. | GntR family transcriptional regulator. | 0.720 |
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