Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0672 | MDS_0846 | MDS_0672 | MDS_0846 | acyl-CoA dehydrogenase domain-containing protein. | Dehydratase. | 0.611 |
MDS_0672 | MDS_0848 | MDS_0672 | MDS_0848 | acyl-CoA dehydrogenase domain-containing protein. | 3-ketoacyl-(acyl-carrier-protein) reductase. | 0.617 |
MDS_0672 | MDS_0849 | MDS_0672 | MDS_0849 | acyl-CoA dehydrogenase domain-containing protein. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.852 |
MDS_0672 | MDS_1792 | MDS_0672 | MDS_1792 | acyl-CoA dehydrogenase domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.773 |
MDS_0672 | MDS_2116 | MDS_0672 | MDS_2116 | acyl-CoA dehydrogenase domain-containing protein. | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | 0.975 |
MDS_0672 | MDS_2754 | MDS_0672 | MDS_2754 | acyl-CoA dehydrogenase domain-containing protein. | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein. | 0.853 |
MDS_0672 | fadB | MDS_0672 | MDS_1633 | acyl-CoA dehydrogenase domain-containing protein. | Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.966 |
MDS_0846 | MDS_0672 | MDS_0846 | MDS_0672 | Dehydratase. | acyl-CoA dehydrogenase domain-containing protein. | 0.611 |
MDS_0846 | MDS_0847 | MDS_0846 | MDS_0847 | Dehydratase. | AraC family transcriptional regulator. | 0.628 |
MDS_0846 | MDS_0848 | MDS_0846 | MDS_0848 | Dehydratase. | 3-ketoacyl-(acyl-carrier-protein) reductase. | 0.892 |
MDS_0846 | MDS_0849 | MDS_0846 | MDS_0849 | Dehydratase. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.866 |
MDS_0846 | MDS_1792 | MDS_0846 | MDS_1792 | Dehydratase. | Amino acid adenylation domain-containing protein. | 0.613 |
MDS_0846 | MDS_2116 | MDS_0846 | MDS_2116 | Dehydratase. | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | 0.805 |
MDS_0846 | MDS_2460 | MDS_0846 | MDS_2460 | Dehydratase. | Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.572 |
MDS_0846 | MDS_2554 | MDS_0846 | MDS_2554 | Dehydratase. | Hypothetical protein. | 0.572 |
MDS_0846 | MDS_2754 | MDS_0846 | MDS_2754 | Dehydratase. | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein. | 0.590 |
MDS_0846 | fadB | MDS_0846 | MDS_1633 | Dehydratase. | Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.649 |
MDS_0847 | MDS_0846 | MDS_0847 | MDS_0846 | AraC family transcriptional regulator. | Dehydratase. | 0.628 |
MDS_0847 | MDS_1792 | MDS_0847 | MDS_1792 | AraC family transcriptional regulator. | Amino acid adenylation domain-containing protein. | 0.442 |
MDS_0848 | MDS_0672 | MDS_0848 | MDS_0672 | 3-ketoacyl-(acyl-carrier-protein) reductase. | acyl-CoA dehydrogenase domain-containing protein. | 0.617 |
page 1 of 4