STRINGSTRING
MDS_0895 MDS_0895 MDS_0894 MDS_0894 MDS_3273 MDS_3273 MDS_1077 MDS_1077 MDS_1037 MDS_1037 MDS_1508 MDS_1508 MDS_1079 MDS_1079 MDS_4783 MDS_4783 MDS_1766 MDS_1766 MDS_0382 MDS_0382 MDS_1076 MDS_1076
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0895Signaling modulator of AmpD, AmpE. (277 aa)    
Predicted Functional Partners:
MDS_0894
N-acetyl-anhydromuranmyl-L-alanine amidase.
  
  
 0.846
MDS_3273
Hypothetical protein.
  
     0.759
MDS_1077
Carbohydrate-binding and sugar hydrolysis.
  
     0.732
MDS_1037
Hypothetical protein.
  
     0.718
MDS_1508
Membrane protein-like protein.
  
     0.708
MDS_1079
Sel1 domain-containing protein.
  
     0.700
MDS_4783
Hypothetical protein.
  
     0.700
MDS_1766
Alginate biosynthesis transcriptional activator.
  
     0.690
MDS_0382
Hypothetical protein.
  
     0.680
MDS_1076
Hypothetical protein.
  
     0.677
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.