STRINGSTRING
MDS_0917 MDS_0917 MDS_1376 MDS_1376 cueR cueR MDS_0919 MDS_0919 MDS_2497 MDS_2497 MDS_2096 MDS_2096 MDS_4556 MDS_4556 MDS_2494 MDS_2494 MDS_2051 MDS_2051 MDS_2503 MDS_2503 MDS_0352 MDS_0352
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0917Heavy metal translocating P-type ATPase. (789 aa)    
Predicted Functional Partners:
MDS_1376
Superoxide dismutase, copper/zinc binding protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
  
 0.982
cueR
MerR family transcriptional regulator.
 
  
 0.894
MDS_0919
Heavy metal transport/detoxification protein.
 
 
 0.885
MDS_2497
Heavy metal transport/detoxification protein.
 
 
 0.809
MDS_2096
Heavy metal translocating P-type ATPase.
 
 
0.781
MDS_4556
Heavy metal translocating P-type ATPase.
 
 
0.776
MDS_2494
Copper-translocating P-type ATPase.
 
 
0.756
MDS_2051
Multicopper oxidase, type 3.
 
 
 0.647
MDS_2503
CopA family copper resistance protein.
 
 
 0.642
MDS_0352
Iron permease FTR1.
 
   
 0.633
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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