STRINGSTRING
trxB trxB trxA trxA ahpC ahpC MDS_4333 MDS_4333 MDS_1353 MDS_1353 MDS_1065 MDS_1065 MDS_4636 MDS_4636 MDS_0633 MDS_0633 trxA-2 trxA-2 MDS_1121 MDS_1121 MDS_2460 MDS_2460
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxBThioredoxin reductase. (315 aa)    
Predicted Functional Partners:
trxA
Thioredoxin; Belongs to the thioredoxin family.
 
 0.949
ahpC
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.918
MDS_4333
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 
 0.864
MDS_1353
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
 
  
0.846
MDS_1065
Hypothetical protein.
       0.773
MDS_4636
1-Cys peroxiredoxin.
  
 
 0.770
MDS_0633
Thioredoxin.
 
 
 0.727
trxA-2
Thioredoxin.
  
 
 0.704
MDS_1121
Molybdopterin biosynthesis protein MoeB.
  
  
 0.697
MDS_2460
Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 
 0.675
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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