STRINGSTRING
MDS_1078 MDS_1078 MDS_1077 MDS_1077 MDS_1076 MDS_1076 MDS_1079 MDS_1079 MDS_1075 MDS_1075 MDS_1080 MDS_1080 MDS_1081 MDS_1081 MDS_1074 MDS_1074 MDS_1082 MDS_1082 MDS_1073 MDS_1073 MDS_1071 MDS_1071
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_1078Hypothetical protein. (479 aa)    
Predicted Functional Partners:
MDS_1077
Carbohydrate-binding and sugar hydrolysis.
  
  
 0.963
MDS_1076
Hypothetical protein.
  
  
 0.961
MDS_1079
Sel1 domain-containing protein.
  
  
 0.961
MDS_1075
poly(beta-D-mannuronate) lyase.
  
  
 0.960
MDS_1080
Type IV pilus assembly PilZ.
  
  
 0.957
MDS_1081
Hypothetical protein.
  
  
 0.945
MDS_1074
Membrane bound O-acyl transferase, MBOAT family protein; Belongs to the membrane-bound acyltransferase family.
  
  
 0.915
MDS_1082
GDP-mannose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.914
MDS_1073
Hypothetical protein.
  
  
 0.909
MDS_1071
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.905
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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