STRINGSTRING
MDS_1101 MDS_1101 MDS_1099 MDS_1099 MDS_1100 MDS_1100 tolR tolR MDS_1667 MDS_1667 MDS_4253 MDS_4253 MDS_1102 MDS_1102 tolQ tolQ MDS_1666 MDS_1666 MDS_4254 MDS_4254 MDS_4255 MDS_4255
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_1101Putative coat protein A of bacteriophage Pf1. (470 aa)    
Predicted Functional Partners:
MDS_1099
Putative phage-related membrane protein.
       0.773
MDS_1100
Hypothetical protein.
       0.773
tolR
Biopolymer transport protein ExbD/TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.728
MDS_1667
Biopolymer transport protein ExbD/TolR.
  
 
 0.728
MDS_4253
Biopolymer transport protein ExbD/TolR.
  
 
 0.728
MDS_1102
Hypothetical protein.
       0.693
tolQ
MotA/TolQ/ExbB proton channel; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.649
MDS_1666
MotA/TolQ/ExbB proton channel.
  
 
 0.649
MDS_4254
MotA/TolQ/ExbB proton channel.
  
 
 0.649
MDS_4255
MotA/TolQ/ExbB proton channel.
  
 
 0.649
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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