Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0681 | MDS_4709 | MDS_0681 | MDS_4709 | NUDIX hydrolase. | Phosphomannomutase. | 0.906 |
MDS_0681 | prs | MDS_0681 | MDS_1114 | NUDIX hydrolase. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.916 |
MDS_1706 | MDS_1707 | MDS_1706 | MDS_1707 | Transketolase domain-containing protein. | Transketolase central region. | 0.999 |
MDS_1706 | MDS_4709 | MDS_1706 | MDS_4709 | Transketolase domain-containing protein. | Phosphomannomutase. | 0.906 |
MDS_1706 | prs | MDS_1706 | MDS_1114 | Transketolase domain-containing protein. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.913 |
MDS_1706 | rpiA | MDS_1706 | MDS_4554 | Transketolase domain-containing protein. | Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.915 |
MDS_1706 | tkt | MDS_1706 | MDS_0492 | Transketolase domain-containing protein. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.910 |
MDS_1707 | MDS_1706 | MDS_1707 | MDS_1706 | Transketolase central region. | Transketolase domain-containing protein. | 0.999 |
MDS_1707 | MDS_4709 | MDS_1707 | MDS_4709 | Transketolase central region. | Phosphomannomutase. | 0.924 |
MDS_1707 | prs | MDS_1707 | MDS_1114 | Transketolase central region. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.949 |
MDS_1707 | rpiA | MDS_1707 | MDS_4554 | Transketolase central region. | Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.938 |
MDS_1707 | tkt | MDS_1707 | MDS_0492 | Transketolase central region. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.911 |
MDS_4709 | MDS_0681 | MDS_4709 | MDS_0681 | Phosphomannomutase. | NUDIX hydrolase. | 0.906 |
MDS_4709 | MDS_1706 | MDS_4709 | MDS_1706 | Phosphomannomutase. | Transketolase domain-containing protein. | 0.906 |
MDS_4709 | MDS_1707 | MDS_4709 | MDS_1707 | Phosphomannomutase. | Transketolase central region. | 0.924 |
MDS_4709 | glmU | MDS_4709 | MDS_4940 | Phosphomannomutase. | Glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.432 |
MDS_4709 | prs | MDS_4709 | MDS_1114 | Phosphomannomutase. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.941 |
MDS_4709 | rpiA | MDS_4709 | MDS_4554 | Phosphomannomutase. | Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.923 |
MDS_4709 | tkt | MDS_4709 | MDS_0492 | Phosphomannomutase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.931 |
glmU | MDS_4709 | MDS_4940 | MDS_4709 | Glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | Phosphomannomutase. | 0.432 |
page 1 of 3