STRINGSTRING
MDS_1184 MDS_1184 clsB clsB cls cls MDS_4235 MDS_4235 MDS_1183 MDS_1183 MDS_1181 MDS_1181 MDS_1182 MDS_1182 MDS_3775 MDS_3775 MDS_1792 MDS_1792 MDS_1665 MDS_1665 MDS_1185 MDS_1185
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_1184Phospholipase D/transphosphatidylase. (386 aa)    
Predicted Functional Partners:
clsB
Cardiolipin synthase 2; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
  
  
0.922
cls
Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
  
  
 
0.919
MDS_4235
Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
     
 0.910
MDS_1183
YceI family protein; Belongs to the UPF0312 family.
       0.800
MDS_1181
Beta-lactamase.
 
     0.619
MDS_1182
Hypothetical protein.
       0.558
MDS_3775
Scaffold protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
 
 0.547
MDS_1792
Amino acid adenylation domain-containing protein.
   
 
 0.533
MDS_1665
DNA internalization-related competence protein ComA.
   
 
 0.486
MDS_1185
Alpha/beta fold family hydrolase.
  
  
 0.485
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.