STRINGSTRING
MDS_1213 MDS_1213 MDS_1211 MDS_1211 MDS_1212 MDS_1212 MDS_1210 MDS_1210 MDS_1792 MDS_1792 MDS_1208 MDS_1208 MDS_1209 MDS_1209 MDS_1154 MDS_1154
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_1213Major facilitator superfamily transporter. (502 aa)    
Predicted Functional Partners:
MDS_1211
Hydrophobe/amphiphile efflux-1 (HAE1) family protein.
     
 0.804
MDS_1212
oprM, RS05459.
     
 0.781
MDS_1210
Efflux transporter, RND family, MFP subunit.
     
 0.762
MDS_1792
Amino acid adenylation domain-containing protein.
    
 0.598
MDS_1208
Integral membrane sensor signal transduction histidine kinase.
     
 0.519
MDS_1209
Two component transcriptional regulator.
       0.493
MDS_1154
Bcr/CflA subfamily drug resistance transporter.
  
  
 0.440
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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