STRINGSTRING
MDS_1335 MDS_1335 MDS_1333 MDS_1333 MDS_1336 MDS_1336 MDS_4804 MDS_4804 MDS_1347 MDS_1347 MDS_0669 MDS_0669 MDS_0409 MDS_0409 MDS_2982 MDS_2982 MDS_3285 MDS_3285 MDS_1639 MDS_1639
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_1335Hypothetical protein. (136 aa)    
Predicted Functional Partners:
MDS_1333
Deaminase-reductase domain-containing protein.
       0.572
MDS_1336
DEAD/DEAH box helicase domain-containing protein; Belongs to the DEAD box helicase family.
       0.554
MDS_4804
Hypothetical protein.
  
    0.549
MDS_1347
Hypothetical protein.
  
     0.530
MDS_0669
LmbE family protein.
  
     0.465
MDS_0409
Adenylate cyclase.
  
     0.455
MDS_2982
Hypothetical protein.
  
     0.453
MDS_3285
Hypothetical protein.
  
     0.433
MDS_1639
SOS cell division inhibitor SulA; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.
  
     0.411
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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