STRINGSTRING
MDS_1365 MDS_1365 MDS_1364 MDS_1364 MDS_1363 MDS_1363 MDS_1540 MDS_1540 MDS_0867 MDS_0867 MDS_0306 MDS_0306
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_1365Ketosteroid isomerase-like protein. (140 aa)    
Predicted Functional Partners:
MDS_1364
Protein of unknown function DUF899, thioredoxin family protein.
 
     0.831
MDS_1363
DGPFAETKE family protein.
 
     0.809
MDS_1540
RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family.
 
     0.433
MDS_0867
Acetyltransferase-like protein.
  
     0.406
MDS_0306
acetyl-CoA hydrolase-like protein.
 
     0.400
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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