STRINGSTRING
livG livG livM livM MDS_1441 MDS_1441 MDS_4202 MDS_4202 MDS_1442 MDS_1442 MDS_4203 MDS_4203 MDS_4201 MDS_4201 MDS_1432 MDS_1432 MDS_1438 MDS_1438 urtB urtB urtC urtC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livGLeucine/isoleucine/valine transporter ATP-binding subunit. (255 aa)    
Predicted Functional Partners:
livM
Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.
  
 0.998
MDS_1441
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
MDS_4202
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.991
MDS_1442
Extracellular ligand-binding receptor.
 
 
 0.990
MDS_4203
ABC transporter related protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.980
MDS_4201
Putative Leu/Ile/Val-binding protein.
 
 
 0.950
MDS_1432
Extracellular ligand-binding receptor.
 
 
 0.944
MDS_1438
ABC transporter related protein; Belongs to the ABC transporter superfamily.
 
  
0.944
urtB
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.931
urtC
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.924
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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