Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_1227 | MDS_1469 | MDS_1227 | MDS_1469 | Hypothetical protein. | NUDIX hydrolase. | 0.433 |
MDS_1227 | MDS_3709 | MDS_1227 | MDS_3709 | Hypothetical protein. | Hypothetical protein. | 0.528 |
MDS_1468 | MDS_1469 | MDS_1468 | MDS_1469 | Isochorismatase hydrolase. | NUDIX hydrolase. | 0.631 |
MDS_1468 | MDS_1792 | MDS_1468 | MDS_1792 | Isochorismatase hydrolase. | Amino acid adenylation domain-containing protein. | 0.638 |
MDS_1468 | nadE | MDS_1468 | MDS_1466 | Isochorismatase hydrolase. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.923 |
MDS_1468 | pncB | MDS_1468 | MDS_1467 | Isochorismatase hydrolase. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.994 |
MDS_1469 | MDS_1227 | MDS_1469 | MDS_1227 | NUDIX hydrolase. | Hypothetical protein. | 0.433 |
MDS_1469 | MDS_1468 | MDS_1469 | MDS_1468 | NUDIX hydrolase. | Isochorismatase hydrolase. | 0.631 |
MDS_1469 | MDS_1792 | MDS_1469 | MDS_1792 | NUDIX hydrolase. | Amino acid adenylation domain-containing protein. | 0.435 |
MDS_1469 | MDS_3709 | MDS_1469 | MDS_3709 | NUDIX hydrolase. | Hypothetical protein. | 0.439 |
MDS_1469 | nadE | MDS_1469 | MDS_1466 | NUDIX hydrolase. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.616 |
MDS_1469 | pncB | MDS_1469 | MDS_1467 | NUDIX hydrolase. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.604 |
MDS_1792 | MDS_1468 | MDS_1792 | MDS_1468 | Amino acid adenylation domain-containing protein. | Isochorismatase hydrolase. | 0.638 |
MDS_1792 | MDS_1469 | MDS_1792 | MDS_1469 | Amino acid adenylation domain-containing protein. | NUDIX hydrolase. | 0.435 |
MDS_1792 | nadE | MDS_1792 | MDS_1466 | Amino acid adenylation domain-containing protein. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.650 |
MDS_3709 | MDS_1227 | MDS_3709 | MDS_1227 | Hypothetical protein. | Hypothetical protein. | 0.528 |
MDS_3709 | MDS_1469 | MDS_3709 | MDS_1469 | Hypothetical protein. | NUDIX hydrolase. | 0.439 |
nadE | MDS_1468 | MDS_1466 | MDS_1468 | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | Isochorismatase hydrolase. | 0.923 |
nadE | MDS_1469 | MDS_1466 | MDS_1469 | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | NUDIX hydrolase. | 0.616 |
nadE | MDS_1792 | MDS_1466 | MDS_1792 | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | Amino acid adenylation domain-containing protein. | 0.650 |
page 1 of 2