STRINGSTRING
MDS_1472 MDS_1472 MDS_1471 MDS_1471 MDS_1473 MDS_1473 MDS_1470 MDS_1470 MDS_1474 MDS_1474
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_1472Preprotein translocase subunit SecA. (64 aa)    
Predicted Functional Partners:
MDS_1471
Hypothetical protein.
       0.800
MDS_1473
Water stress/hypersensitive response protein.
       0.763
MDS_1470
Penicillin amidase.
       0.580
MDS_1474
Hypothetical protein.
       0.476
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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