STRINGSTRING
MDS_1486 MDS_1486 MDS_1488 MDS_1488 MDS_1487 MDS_1487 MDS_1484 MDS_1484 MDS_1485 MDS_1485 MDS_1483 MDS_1483 MDS_1498 MDS_1498 MDS_1499 MDS_1499 MDS_1501 MDS_1501 MDS_1502 MDS_1502 MDS_1503 MDS_1503
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_1486NADH dehydrogenase (quinone). (498 aa)    
Predicted Functional Partners:
MDS_1488
NADH dehydrogenase (quinone).
 
 
0.997
MDS_1487
NADH-ubiquinone oxidoreductase, chain 4L.
 
 
 0.996
MDS_1484
Multiple resistance and pH regulation protein F.
 
 
 0.995
MDS_1485
Cation antiporter.
 
 
 0.995
MDS_1483
Hypothetical protein.
 
 
 0.992
MDS_1498
Putative monovalent cation/H+ antiporter subunit A.
 
 
0.989
MDS_1499
Putative monovalent cation/H+ antiporter subunit C.
 
 
 0.982
MDS_1501
Cation antiporter.
 
 
 0.981
MDS_1502
Multiple resistance and pH regulation protein F.
 
 
 0.972
MDS_1503
Putative monovalent cation/H+ antiporter subunit G.
 
 
 0.969
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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