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MDS_1510 MDS_1510 MDS_1512 MDS_1512 MDS_1511 MDS_1511 MDS_1513 MDS_1513 MDS_1514 MDS_1514 MDS_1204 MDS_1204 MDS_1205 MDS_1205 MDS_1249 MDS_1249 MDS_1206 MDS_1206 MDS_1517 MDS_1517 MDS_2750 MDS_2750
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_1510Putative ammonia monooxygenase. (340 aa)    
Predicted Functional Partners:
MDS_1512
Hypothetical protein.
 
    0.906
MDS_1511
Hypothetical protein.
 
    0.882
MDS_1513
Hypothetical protein.
 
    0.806
MDS_1514
Outer membrane porin.
  
    0.621
MDS_1204
Hypothetical protein.
 
    0.600
MDS_1205
Membrane protein TctB, putative.
 
    0.582
MDS_1249
Hypothetical protein.
 
    0.538
MDS_1206
Putative transport-related membrane protein.
 
    0.506
MDS_1517
Integral membrane sensor signal transduction histidine kinase.
 
     0.499
MDS_2750
Protein of unknown function DUF112 transmembrane.
 
    0.482
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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