Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0135 | MDS_0160 | MDS_0135 | MDS_0160 | Cytochrome c oxidase subunit III family protein. | Cytochrome c oxidase assembly protein. | 0.658 |
MDS_0135 | MDS_0165 | MDS_0135 | MDS_0165 | Cytochrome c oxidase subunit III family protein. | Cytochrome oxidase assembly. | 0.551 |
MDS_0135 | coxB-2 | MDS_0135 | MDS_2466 | Cytochrome c oxidase subunit III family protein. | Cytochrome c, monohem. | 0.996 |
MDS_0135 | ctaD | MDS_0135 | MDS_0159 | Cytochrome c oxidase subunit III family protein. | Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.971 |
MDS_0135 | ctaD-2 | MDS_0135 | MDS_2465 | Cytochrome c oxidase subunit III family protein. | Cytochrome-c oxidase; Belongs to the heme-copper respiratory oxidase family. | 0.970 |
MDS_0135 | cyoA | MDS_0135 | MDS_1575 | Cytochrome c oxidase subunit III family protein. | Putative cytochrome o ubiquinol oxidase subunit II. | 0.971 |
MDS_0135 | cyoB | MDS_0135 | MDS_1576 | Cytochrome c oxidase subunit III family protein. | Cytochrome o ubiquinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. | 0.968 |
MDS_0135 | cyoD | MDS_0135 | MDS_1578 | Cytochrome c oxidase subunit III family protein. | Cytochrome o ubiquinol oxidase subunit IV. | 0.951 |
MDS_0135 | cyoE-2 | MDS_0135 | MDS_1579 | Cytochrome c oxidase subunit III family protein. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.933 |
MDS_0160 | MDS_0135 | MDS_0160 | MDS_0135 | Cytochrome c oxidase assembly protein. | Cytochrome c oxidase subunit III family protein. | 0.658 |
MDS_0160 | MDS_0165 | MDS_0160 | MDS_0165 | Cytochrome c oxidase assembly protein. | Cytochrome oxidase assembly. | 0.992 |
MDS_0160 | coxB-2 | MDS_0160 | MDS_2466 | Cytochrome c oxidase assembly protein. | Cytochrome c, monohem. | 0.808 |
MDS_0160 | ctaD | MDS_0160 | MDS_0159 | Cytochrome c oxidase assembly protein. | Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.984 |
MDS_0160 | ctaD-2 | MDS_0160 | MDS_2465 | Cytochrome c oxidase assembly protein. | Cytochrome-c oxidase; Belongs to the heme-copper respiratory oxidase family. | 0.665 |
MDS_0160 | cyoA | MDS_0160 | MDS_1575 | Cytochrome c oxidase assembly protein. | Putative cytochrome o ubiquinol oxidase subunit II. | 0.663 |
MDS_0160 | cyoB | MDS_0160 | MDS_1576 | Cytochrome c oxidase assembly protein. | Cytochrome o ubiquinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. | 0.556 |
MDS_0160 | cyoC | MDS_0160 | MDS_1577 | Cytochrome c oxidase assembly protein. | Cytochrome o ubiquinol oxidase subunit III. | 0.660 |
MDS_0160 | cyoE-2 | MDS_0160 | MDS_1579 | Cytochrome c oxidase assembly protein. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.985 |
MDS_0165 | MDS_0135 | MDS_0165 | MDS_0135 | Cytochrome oxidase assembly. | Cytochrome c oxidase subunit III family protein. | 0.551 |
MDS_0165 | MDS_0160 | MDS_0165 | MDS_0160 | Cytochrome oxidase assembly. | Cytochrome c oxidase assembly protein. | 0.992 |
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