MDS_1744 protein (Pseudomonas mendocina NK01)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Experiments

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[Homology]

Score

MDS_1744

ABC transporter related protein. (254 aa)

Predicted Functional Partners:

MDS_1743

0.993

MDS_1742

0.992

MDS_1741

0.974

MDS_4595

0.881

MDS_4596

0.866

MDS_4594

0.823

MDS_3054

0.776

MDS_1745

0.773

ehuD

0.772

ehuC

0.771

Your Current Organism:

Pseudomonas mendocina NK01

NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MDS_1741	MDS_1742	MDS_1741	MDS_1742	Cationic amino acid ABC transporter, periplasmic binding protein.	Arginine/ornithine ABC transporter, permease protein.	0.986
MDS_1741	MDS_1743	MDS_1741	MDS_1743	Cationic amino acid ABC transporter, periplasmic binding protein.	Polar amino acid ABC transporter, inner membrane subunit.	0.989
MDS_1741	MDS_1744	MDS_1741	MDS_1744	Cationic amino acid ABC transporter, periplasmic binding protein.	ABC transporter related protein.	0.974
MDS_1741	MDS_1745	MDS_1741	MDS_1745	Cationic amino acid ABC transporter, periplasmic binding protein.	AraC family transcriptional regulator.	0.421
MDS_1741	MDS_4595	MDS_1741	MDS_4595	Cationic amino acid ABC transporter, periplasmic binding protein.	Polar amino acid ABC transporter, inner membrane subunit.	0.902
MDS_1741	MDS_4596	MDS_1741	MDS_4596	Cationic amino acid ABC transporter, periplasmic binding protein.	Polar amino acid ABC transporter, inner membrane subunit.	0.929
MDS_1741	ehuC	MDS_1741	MDS_0051	Cationic amino acid ABC transporter, periplasmic binding protein.	Amino acid ABC transporter, permease protein.	0.911
MDS_1741	ehuD	MDS_1741	MDS_0050	Cationic amino acid ABC transporter, periplasmic binding protein.	Amino acid ABC transporter, permease protein.	0.944
MDS_1742	MDS_1741	MDS_1742	MDS_1741	Arginine/ornithine ABC transporter, permease protein.	Cationic amino acid ABC transporter, periplasmic binding protein.	0.986
MDS_1742	MDS_1743	MDS_1742	MDS_1743	Arginine/ornithine ABC transporter, permease protein.	Polar amino acid ABC transporter, inner membrane subunit.	0.981
MDS_1742	MDS_1744	MDS_1742	MDS_1744	Arginine/ornithine ABC transporter, permease protein.	ABC transporter related protein.	0.992
MDS_1742	MDS_1745	MDS_1742	MDS_1745	Arginine/ornithine ABC transporter, permease protein.	AraC family transcriptional regulator.	0.683
MDS_1742	MDS_3054	MDS_1742	MDS_3054	Arginine/ornithine ABC transporter, permease protein.	Amino acid ABC transporter periplasmic substrate-binding protein.	0.808
MDS_1742	MDS_4594	MDS_1742	MDS_4594	Arginine/ornithine ABC transporter, permease protein.	Extracellular solute-binding protein; Belongs to the bacterial solute-binding protein 3 family.	0.873
MDS_1742	MDS_4595	MDS_1742	MDS_4595	Arginine/ornithine ABC transporter, permease protein.	Polar amino acid ABC transporter, inner membrane subunit.	0.409
MDS_1742	MDS_4596	MDS_1742	MDS_4596	Arginine/ornithine ABC transporter, permease protein.	Polar amino acid ABC transporter, inner membrane subunit.	0.712
MDS_1742	ehuC	MDS_1742	MDS_0051	Arginine/ornithine ABC transporter, permease protein.	Amino acid ABC transporter, permease protein.	0.509
MDS_1742	ehuD	MDS_1742	MDS_0050	Arginine/ornithine ABC transporter, permease protein.	Amino acid ABC transporter, permease protein.	0.541
MDS_1743	MDS_1741	MDS_1743	MDS_1741	Polar amino acid ABC transporter, inner membrane subunit.	Cationic amino acid ABC transporter, periplasmic binding protein.	0.989
MDS_1743	MDS_1742	MDS_1743	MDS_1742	Polar amino acid ABC transporter, inner membrane subunit.	Arginine/ornithine ABC transporter, permease protein.	0.981