Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_1434 | MDS_1745 | MDS_1434 | MDS_1745 | AraC family transcriptional regulator. | AraC family transcriptional regulator. | 0.562 |
MDS_1434 | MDS_2304 | MDS_1434 | MDS_2304 | AraC family transcriptional regulator. | AraC family transcriptional regulator. | 0.742 |
MDS_1434 | MDS_3031 | MDS_1434 | MDS_3031 | AraC family transcriptional regulator. | AraC family transcriptional regulator. | 0.752 |
MDS_1742 | MDS_1743 | MDS_1742 | MDS_1743 | Arginine/ornithine ABC transporter, permease protein. | Polar amino acid ABC transporter, inner membrane subunit. | 0.981 |
MDS_1742 | MDS_1744 | MDS_1742 | MDS_1744 | Arginine/ornithine ABC transporter, permease protein. | ABC transporter related protein. | 0.992 |
MDS_1742 | MDS_1745 | MDS_1742 | MDS_1745 | Arginine/ornithine ABC transporter, permease protein. | AraC family transcriptional regulator. | 0.683 |
MDS_1743 | MDS_1742 | MDS_1743 | MDS_1742 | Polar amino acid ABC transporter, inner membrane subunit. | Arginine/ornithine ABC transporter, permease protein. | 0.981 |
MDS_1743 | MDS_1744 | MDS_1743 | MDS_1744 | Polar amino acid ABC transporter, inner membrane subunit. | ABC transporter related protein. | 0.993 |
MDS_1743 | MDS_1745 | MDS_1743 | MDS_1745 | Polar amino acid ABC transporter, inner membrane subunit. | AraC family transcriptional regulator. | 0.559 |
MDS_1744 | MDS_1742 | MDS_1744 | MDS_1742 | ABC transporter related protein. | Arginine/ornithine ABC transporter, permease protein. | 0.992 |
MDS_1744 | MDS_1743 | MDS_1744 | MDS_1743 | ABC transporter related protein. | Polar amino acid ABC transporter, inner membrane subunit. | 0.993 |
MDS_1744 | MDS_1745 | MDS_1744 | MDS_1745 | ABC transporter related protein. | AraC family transcriptional regulator. | 0.773 |
MDS_1744 | astA | MDS_1744 | MDS_1749 | ABC transporter related protein. | Arginine succinyltransferase. | 0.442 |
MDS_1745 | MDS_1434 | MDS_1745 | MDS_1434 | AraC family transcriptional regulator. | AraC family transcriptional regulator. | 0.562 |
MDS_1745 | MDS_1742 | MDS_1745 | MDS_1742 | AraC family transcriptional regulator. | Arginine/ornithine ABC transporter, permease protein. | 0.683 |
MDS_1745 | MDS_1743 | MDS_1745 | MDS_1743 | AraC family transcriptional regulator. | Polar amino acid ABC transporter, inner membrane subunit. | 0.559 |
MDS_1745 | MDS_1744 | MDS_1745 | MDS_1744 | AraC family transcriptional regulator. | ABC transporter related protein. | 0.773 |
MDS_1745 | MDS_2304 | MDS_1745 | MDS_2304 | AraC family transcriptional regulator. | AraC family transcriptional regulator. | 0.751 |
MDS_1745 | MDS_3031 | MDS_1745 | MDS_3031 | AraC family transcriptional regulator. | AraC family transcriptional regulator. | 0.698 |
MDS_1745 | MDS_3655 | MDS_1745 | MDS_3655 | AraC family transcriptional regulator. | AraC family transcriptional regulator. | 0.758 |
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