Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_1195 | MDS_2221 | MDS_1195 | MDS_2221 | L-aspartate-like protein. | Lysine decarboxylase. | 0.822 |
MDS_1195 | arcA | MDS_1195 | MDS_1160 | L-aspartate-like protein. | Arginine deiminase. | 0.921 |
MDS_1195 | argD-2 | MDS_1195 | MDS_1747 | L-aspartate-like protein. | Bifunctional N-succinyldiaminopimelate- aminotransferase/acetylornithine transaminase protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.879 |
MDS_1195 | argH | MDS_1195 | MDS_0336 | L-aspartate-like protein. | Argininosuccinate lyase. | 0.927 |
MDS_1195 | aruF | MDS_1195 | MDS_1748 | L-aspartate-like protein. | Arginine succinyltransferase. | 0.807 |
MDS_1195 | astA | MDS_1195 | MDS_1749 | L-aspartate-like protein. | Arginine succinyltransferase. | 0.807 |
MDS_1195 | speA | MDS_1195 | MDS_0810 | L-aspartate-like protein. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.842 |
MDS_2221 | MDS_1195 | MDS_2221 | MDS_1195 | Lysine decarboxylase. | L-aspartate-like protein. | 0.822 |
MDS_2221 | arcA | MDS_2221 | MDS_1160 | Lysine decarboxylase. | Arginine deiminase. | 0.854 |
MDS_2221 | argH | MDS_2221 | MDS_0336 | Lysine decarboxylase. | Argininosuccinate lyase. | 0.822 |
MDS_2221 | aruF | MDS_2221 | MDS_1748 | Lysine decarboxylase. | Arginine succinyltransferase. | 0.921 |
MDS_2221 | astA | MDS_2221 | MDS_1749 | Lysine decarboxylase. | Arginine succinyltransferase. | 0.926 |
MDS_2221 | speA | MDS_2221 | MDS_0810 | Lysine decarboxylase. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.924 |
arcA | MDS_1195 | MDS_1160 | MDS_1195 | Arginine deiminase. | L-aspartate-like protein. | 0.921 |
arcA | MDS_2221 | MDS_1160 | MDS_2221 | Arginine deiminase. | Lysine decarboxylase. | 0.854 |
arcA | argH | MDS_1160 | MDS_0336 | Arginine deiminase. | Argininosuccinate lyase. | 0.921 |
arcA | aruF | MDS_1160 | MDS_1748 | Arginine deiminase. | Arginine succinyltransferase. | 0.822 |
arcA | astA | MDS_1160 | MDS_1749 | Arginine deiminase. | Arginine succinyltransferase. | 0.822 |
arcA | speA | MDS_1160 | MDS_0810 | Arginine deiminase. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.823 |
argD-2 | MDS_1195 | MDS_1747 | MDS_1195 | Bifunctional N-succinyldiaminopimelate- aminotransferase/acetylornithine transaminase protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | L-aspartate-like protein. | 0.879 |
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