Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_1752 | aruF | MDS_1752 | MDS_1748 | Hypothetical protein. | Arginine succinyltransferase. | 0.535 |
MDS_1752 | astA | MDS_1752 | MDS_1749 | Hypothetical protein. | Arginine succinyltransferase. | 0.629 |
MDS_1752 | astB | MDS_1752 | MDS_1751 | Hypothetical protein. | Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.732 |
MDS_1752 | astD | MDS_1752 | MDS_1750 | Hypothetical protein. | Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.730 |
MDS_1752 | astE | MDS_1752 | MDS_1753 | Hypothetical protein. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.844 |
MDS_3091 | MDS_3198 | MDS_3091 | MDS_3198 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate dehydrogenase. | 0.912 |
MDS_3091 | astE | MDS_3091 | MDS_1753 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.808 |
MDS_3091 | glsA | MDS_3091 | MDS_0155 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutaminase; Belongs to the glutaminase family. | 0.911 |
MDS_3091 | proA | MDS_3091 | MDS_4107 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.853 |
MDS_3091 | putA | MDS_3091 | MDS_1162 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.957 |
MDS_3198 | MDS_3091 | MDS_3198 | MDS_3091 | Glutamate dehydrogenase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.912 |
MDS_3198 | aruF | MDS_3198 | MDS_1748 | Glutamate dehydrogenase. | Arginine succinyltransferase. | 0.432 |
MDS_3198 | astA | MDS_3198 | MDS_1749 | Glutamate dehydrogenase. | Arginine succinyltransferase. | 0.628 |
MDS_3198 | astB | MDS_3198 | MDS_1751 | Glutamate dehydrogenase. | Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.834 |
MDS_3198 | astD | MDS_3198 | MDS_1750 | Glutamate dehydrogenase. | Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.606 |
MDS_3198 | astE | MDS_3198 | MDS_1753 | Glutamate dehydrogenase. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.918 |
MDS_3198 | glsA | MDS_3198 | MDS_0155 | Glutamate dehydrogenase. | Glutaminase; Belongs to the glutaminase family. | 0.904 |
MDS_3198 | proA | MDS_3198 | MDS_4107 | Glutamate dehydrogenase. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.800 |
MDS_3198 | putA | MDS_3198 | MDS_1162 | Glutamate dehydrogenase. | Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.936 |
aruF | MDS_1752 | MDS_1748 | MDS_1752 | Arginine succinyltransferase. | Hypothetical protein. | 0.535 |
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