Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MDS_0145 | MDS_1785 | Putative nitrate reductase. | ABC transporter ATP-binding protein. | 0.532 |
MDS_0145 | MDS_1789 | Putative nitrate reductase. | Cyclic peptide transporter. | 0.532 |
MDS_0145 | MDS_1790 | Putative nitrate reductase. | Lysine/ornithine N-monooxygenase-like protein. | 0.805 |
MDS_0145 | MDS_1791 | Putative nitrate reductase. | Amino acid adenylation domain-containing protein. | 0.434 |
MDS_0145 | MDS_1792 | Putative nitrate reductase. | Amino acid adenylation domain-containing protein. | 0.625 |
MDS_0145 | MDS_1793 | Putative nitrate reductase. | Diaminobutyrate--2-oxoglutarate aminotransferase. | 0.817 |
MDS_0145 | MDS_1797 | Putative nitrate reductase. | MbtH domain-containing protein. | 0.529 |
MDS_0145 | MDS_1805 | Putative nitrate reductase. | Cyclic peptide transporter. | 0.532 |
MDS_0145 | MDS_3830 | Putative nitrate reductase. | Peptidase M19, renal dipeptidase. | 0.843 |
MDS_1785 | MDS_0145 | ABC transporter ATP-binding protein. | Putative nitrate reductase. | 0.532 |
MDS_1785 | MDS_1789 | ABC transporter ATP-binding protein. | Cyclic peptide transporter. | 0.431 |
MDS_1785 | MDS_1790 | ABC transporter ATP-binding protein. | Lysine/ornithine N-monooxygenase-like protein. | 0.764 |
MDS_1785 | MDS_1791 | ABC transporter ATP-binding protein. | Amino acid adenylation domain-containing protein. | 0.910 |
MDS_1785 | MDS_1792 | ABC transporter ATP-binding protein. | Amino acid adenylation domain-containing protein. | 0.983 |
MDS_1785 | MDS_1793 | ABC transporter ATP-binding protein. | Diaminobutyrate--2-oxoglutarate aminotransferase. | 0.526 |
MDS_1785 | MDS_1797 | ABC transporter ATP-binding protein. | MbtH domain-containing protein. | 0.874 |
MDS_1785 | MDS_1799 | ABC transporter ATP-binding protein. | Hypothetical protein. | 0.431 |
MDS_1785 | MDS_1805 | ABC transporter ATP-binding protein. | Cyclic peptide transporter. | 0.911 |
MDS_1785 | MDS_3830 | ABC transporter ATP-binding protein. | Peptidase M19, renal dipeptidase. | 0.539 |
MDS_1789 | MDS_0145 | Cyclic peptide transporter. | Putative nitrate reductase. | 0.532 |
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