STRINGSTRING
MDS_1790 MDS_1790 MDS_1792 MDS_1792 MDS_1799 MDS_1799 MDS_1791 MDS_1791 MDS_1797 MDS_1797 MDS_1793 MDS_1793 MDS_1789 MDS_1789 MDS_0145 MDS_0145 MDS_3830 MDS_3830 MDS_1785 MDS_1785 MDS_1805 MDS_1805
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_1790Lysine/ornithine N-monooxygenase-like protein. (438 aa)    
Predicted Functional Partners:
MDS_1792
Amino acid adenylation domain-containing protein.
 
 
 0.996
MDS_1799
Hypothetical protein.
  
 0.991
MDS_1791
Amino acid adenylation domain-containing protein.
 
 
 0.976
MDS_1797
MbtH domain-containing protein.
 
  
 0.957
MDS_1793
Diaminobutyrate--2-oxoglutarate aminotransferase.
  
  
 0.923
MDS_1789
Cyclic peptide transporter.
 
  
 0.836
MDS_0145
Putative nitrate reductase.
  
  
 0.805
MDS_3830
Peptidase M19, renal dipeptidase.
  
  
 0.774
MDS_1785
ABC transporter ATP-binding protein.
 
  
 0.764
MDS_1805
Cyclic peptide transporter.
 
  
 0.742
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (16%) [HD]