STRINGSTRING
MDS_1854 MDS_1854 MDS_1855 MDS_1855 flgM flgM flgM-2 flgM-2 MDS_2968 MDS_2968 MDS_0182 MDS_0182 MDS_3132 MDS_3132 MDS_1856 MDS_1856 MDS_1850 MDS_1850 MDS_1825 MDS_1825 MDS_4626 MDS_4626
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_1854Anti-sigma-factor antagonist. (101 aa)    
Predicted Functional Partners:
MDS_1855
Response regulator receiver protein.
 
 0.999
flgM
Anti-sigma-28 factor, FlgM.
  
  
  0.927
flgM-2
Anti-sigma-28 factor, FlgM family protein.
     
  0.900
MDS_2968
Response regulator receiver protein.
 
 
 0.881
MDS_0182
Multi-sensor hybrid histidine kinase.
  
  
 0.873
MDS_3132
Multi-sensor hybrid histidine kinase.
  
  
 0.866
MDS_1856
Hpt protein.
 
  
 0.865
MDS_1850
Flagellar motor switch protein G; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
   0.847
MDS_1825
Flagellar rod assembly protein/muramidase FlgJ.
  
    0.841
MDS_4626
Response regulator receiver modulated diguanylate cyclase.
 
  
 0.839
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.