STRINGSTRING
MDS_1875 MDS_1875 MDS_1874 MDS_1874 MDS_0206 MDS_0206 motA motA MDS_0207 MDS_0207 MDS_3170 MDS_3170 MDS_0700 MDS_0700 MDS_1871 MDS_1871 MDS_3950 MDS_3950 MDS_1850 MDS_1850 MDS_1872 MDS_1872
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_1875Flagellar motor protein MotD. (269 aa)    
Predicted Functional Partners:
MDS_1874
Flagellar motor protein.
 
 0.998
MDS_0206
Flagellar motor protein MotA.
  
 0.966
motA
Flagellar motor protein MotA.
  
 0.966
MDS_0207
OmpA/MotB domain-containing protein.
  
  
 0.921
MDS_3170
Integral membrane sensor hybrid histidine protein kinase.
  
  
 0.909
MDS_0700
Flagellar motor protein MotB.
     
0.908
MDS_1871
Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
  
  
 0.882
MDS_3950
Multi-sensor hybrid histidine kinase.
  
  
 0.876
MDS_1850
Flagellar motor switch protein G; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.870
MDS_1872
CheA signal transduction histidine kinase.
 
  
 0.870
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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