Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0313 | MDS_1815 | MDS_0313 | MDS_1815 | Methyl-accepting chemotaxis protein. | Putative CheW protein. | 0.900 |
MDS_0313 | MDS_1872 | MDS_0313 | MDS_1872 | Methyl-accepting chemotaxis protein. | CheA signal transduction histidine kinase. | 0.987 |
MDS_0313 | MDS_1877 | MDS_0313 | MDS_1877 | Methyl-accepting chemotaxis protein. | Putative CheW protein. | 0.939 |
MDS_0313 | MDS_3950 | MDS_0313 | MDS_3950 | Methyl-accepting chemotaxis protein. | Multi-sensor hybrid histidine kinase. | 0.653 |
MDS_0313 | MDS_4530 | MDS_0313 | MDS_4530 | Methyl-accepting chemotaxis protein. | CheA signal transduction histidine kinase. | 0.987 |
MDS_0313 | cheW-2 | MDS_0313 | MDS_1878 | Methyl-accepting chemotaxis protein. | Putative CheW protein. | 0.984 |
MDS_1815 | MDS_0313 | MDS_1815 | MDS_0313 | Putative CheW protein. | Methyl-accepting chemotaxis protein. | 0.900 |
MDS_1815 | MDS_1871 | MDS_1815 | MDS_1871 | Putative CheW protein. | Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | 0.978 |
MDS_1815 | MDS_1872 | MDS_1815 | MDS_1872 | Putative CheW protein. | CheA signal transduction histidine kinase. | 0.998 |
MDS_1815 | MDS_1877 | MDS_1815 | MDS_1877 | Putative CheW protein. | Putative CheW protein. | 0.956 |
MDS_1815 | MDS_2996 | MDS_1815 | MDS_2996 | Putative CheW protein. | Methyl-accepting chemotaxis sensory transducer. | 0.982 |
MDS_1815 | MDS_3050 | MDS_1815 | MDS_3050 | Putative CheW protein. | Methyl-accepting chemotaxis sensory transducer. | 0.982 |
MDS_1815 | MDS_3598 | MDS_1815 | MDS_3598 | Putative CheW protein. | Methyl-accepting chemotaxis sensory transducer. | 0.904 |
MDS_1815 | MDS_3950 | MDS_1815 | MDS_3950 | Putative CheW protein. | Multi-sensor hybrid histidine kinase. | 0.991 |
MDS_1815 | MDS_4530 | MDS_1815 | MDS_4530 | Putative CheW protein. | CheA signal transduction histidine kinase. | 0.994 |
MDS_1815 | cheW-2 | MDS_1815 | MDS_1878 | Putative CheW protein. | Putative CheW protein. | 0.850 |
MDS_1871 | MDS_1815 | MDS_1871 | MDS_1815 | Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | Putative CheW protein. | 0.978 |
MDS_1871 | MDS_1872 | MDS_1871 | MDS_1872 | Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | CheA signal transduction histidine kinase. | 0.992 |
MDS_1871 | MDS_1877 | MDS_1871 | MDS_1877 | Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | Putative CheW protein. | 0.945 |
MDS_1871 | MDS_2996 | MDS_1871 | MDS_2996 | Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | Methyl-accepting chemotaxis sensory transducer. | 0.728 |
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