Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_1887 | MDS_1888 | MDS_1887 | MDS_1888 | Cytochrome c-type biogenesis protein CcmF. | Periplasmic protein thiol--disulfide oxidoreductase DsbE. | 0.993 |
MDS_1887 | MDS_1889 | MDS_1887 | MDS_1889 | Cytochrome c-type biogenesis protein CcmF. | Cytochrome c biogenesis protein; Possible subunit of a heme lyase. | 0.983 |
MDS_1887 | MDS_1891 | MDS_1887 | MDS_1891 | Cytochrome c-type biogenesis protein CcmF. | Hypothetical protein. | 0.593 |
MDS_1887 | MDS_3570 | MDS_1887 | MDS_3570 | Cytochrome c-type biogenesis protein CcmF. | Hypothetical protein. | 0.774 |
MDS_1887 | ccmA | MDS_1887 | MDS_1882 | Cytochrome c-type biogenesis protein CcmF. | Cytochrome c biogenesis protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.929 |
MDS_1887 | ccmB | MDS_1887 | MDS_1883 | Cytochrome c-type biogenesis protein CcmF. | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | 0.941 |
MDS_1887 | ccmC | MDS_1887 | MDS_1884 | Cytochrome c-type biogenesis protein CcmF. | Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.969 |
MDS_1887 | ccmD | MDS_1887 | MDS_1885 | Cytochrome c-type biogenesis protein CcmF. | Heme exporter protein D; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. | 0.915 |
MDS_1887 | ccmE | MDS_1887 | MDS_1886 | Cytochrome c-type biogenesis protein CcmF. | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.980 |
MDS_1887 | ccmI | MDS_1887 | MDS_1890 | Cytochrome c-type biogenesis protein CcmF. | TPR repeat-containing protein. | 0.991 |
MDS_1888 | MDS_1887 | MDS_1888 | MDS_1887 | Periplasmic protein thiol--disulfide oxidoreductase DsbE. | Cytochrome c-type biogenesis protein CcmF. | 0.993 |
MDS_1888 | MDS_1889 | MDS_1888 | MDS_1889 | Periplasmic protein thiol--disulfide oxidoreductase DsbE. | Cytochrome c biogenesis protein; Possible subunit of a heme lyase. | 0.977 |
MDS_1888 | MDS_1891 | MDS_1888 | MDS_1891 | Periplasmic protein thiol--disulfide oxidoreductase DsbE. | Hypothetical protein. | 0.593 |
MDS_1888 | ccmA | MDS_1888 | MDS_1882 | Periplasmic protein thiol--disulfide oxidoreductase DsbE. | Cytochrome c biogenesis protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.900 |
MDS_1888 | ccmB | MDS_1888 | MDS_1883 | Periplasmic protein thiol--disulfide oxidoreductase DsbE. | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | 0.938 |
MDS_1888 | ccmC | MDS_1888 | MDS_1884 | Periplasmic protein thiol--disulfide oxidoreductase DsbE. | Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.977 |
MDS_1888 | ccmD | MDS_1888 | MDS_1885 | Periplasmic protein thiol--disulfide oxidoreductase DsbE. | Heme exporter protein D; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. | 0.904 |
MDS_1888 | ccmE | MDS_1888 | MDS_1886 | Periplasmic protein thiol--disulfide oxidoreductase DsbE. | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.977 |
MDS_1888 | ccmI | MDS_1888 | MDS_1890 | Periplasmic protein thiol--disulfide oxidoreductase DsbE. | TPR repeat-containing protein. | 0.990 |
MDS_1889 | MDS_1887 | MDS_1889 | MDS_1887 | Cytochrome c biogenesis protein; Possible subunit of a heme lyase. | Cytochrome c-type biogenesis protein CcmF. | 0.983 |
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