Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0578 | MDS_1764 | MDS_0578 | MDS_1764 | Malate dehydrogenase. | Oxaloacetate decarboxylase. | 0.939 |
MDS_0578 | aceE | MDS_0578 | MDS_0649 | Malate dehydrogenase. | Pyruvate dehydrogenase subunit E1; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.933 |
MDS_0578 | eno | MDS_0578 | MDS_3310 | Malate dehydrogenase. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. | 0.411 |
MDS_0578 | lldD | MDS_0578 | MDS_3940 | Malate dehydrogenase. | L-lactate dehydrogenase; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain. | 0.929 |
MDS_0578 | oadA | MDS_0578 | MDS_4822 | Malate dehydrogenase. | Pyruvate carboxylase subunit B. | 0.939 |
MDS_0578 | pyk | MDS_0578 | MDS_1903 | Malate dehydrogenase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.950 |
MDS_1764 | MDS_0578 | MDS_1764 | MDS_0578 | Oxaloacetate decarboxylase. | Malate dehydrogenase. | 0.939 |
MDS_1764 | aceE | MDS_1764 | MDS_0649 | Oxaloacetate decarboxylase. | Pyruvate dehydrogenase subunit E1; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.934 |
MDS_1764 | eno | MDS_1764 | MDS_3310 | Oxaloacetate decarboxylase. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. | 0.593 |
MDS_1764 | lldD | MDS_1764 | MDS_3940 | Oxaloacetate decarboxylase. | L-lactate dehydrogenase; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain. | 0.902 |
MDS_1764 | oadA | MDS_1764 | MDS_4822 | Oxaloacetate decarboxylase. | Pyruvate carboxylase subunit B. | 0.949 |
MDS_1764 | pgi | MDS_1764 | MDS_3898 | Oxaloacetate decarboxylase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.421 |
MDS_1764 | pyk | MDS_1764 | MDS_1903 | Oxaloacetate decarboxylase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.940 |
MDS_1904 | aceE | MDS_1904 | MDS_0649 | Glycerate 2-kinase. | Pyruvate dehydrogenase subunit E1; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.800 |
MDS_1904 | eno | MDS_1904 | MDS_3310 | Glycerate 2-kinase. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. | 0.935 |
MDS_1904 | pgi | MDS_1904 | MDS_3898 | Glycerate 2-kinase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.841 |
MDS_1904 | pyk | MDS_1904 | MDS_1903 | Glycerate 2-kinase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.946 |
aceE | MDS_0578 | MDS_0649 | MDS_0578 | Pyruvate dehydrogenase subunit E1; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Malate dehydrogenase. | 0.933 |
aceE | MDS_1764 | MDS_0649 | MDS_1764 | Pyruvate dehydrogenase subunit E1; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Oxaloacetate decarboxylase. | 0.934 |
aceE | MDS_1904 | MDS_0649 | MDS_1904 | Pyruvate dehydrogenase subunit E1; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Glycerate 2-kinase. | 0.800 |
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