Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_1354 | MDS_1917 | MDS_1354 | MDS_1917 | Hypothetical protein. | Hypothetical protein. | 0.419 |
MDS_1354 | allA | MDS_1354 | MDS_0362 | Hypothetical protein. | Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. | 0.967 |
MDS_1354 | allA-2 | MDS_1354 | MDS_1918 | Hypothetical protein. | Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. | 0.964 |
MDS_1354 | uraD | MDS_1354 | MDS_1919 | Hypothetical protein. | Hypothetical protein. | 0.427 |
MDS_1917 | MDS_1354 | MDS_1917 | MDS_1354 | Hypothetical protein. | Hypothetical protein. | 0.419 |
MDS_1917 | allA | MDS_1917 | MDS_0362 | Hypothetical protein. | Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. | 0.790 |
MDS_1917 | allA-2 | MDS_1917 | MDS_1918 | Hypothetical protein. | Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. | 0.929 |
MDS_1917 | uraD | MDS_1917 | MDS_1919 | Hypothetical protein. | Hypothetical protein. | 0.912 |
MDS_2362 | allA | MDS_2362 | MDS_0362 | Isocitrate lyase. | Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. | 0.830 |
MDS_2362 | allA-2 | MDS_2362 | MDS_1918 | Isocitrate lyase. | Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. | 0.829 |
MDS_2362 | gcl | MDS_2362 | MDS_1908 | Isocitrate lyase. | Glyoxylate carboligase; Belongs to the TPP enzyme family. | 0.920 |
MDS_2362 | glcB | MDS_2362 | MDS_0213 | Isocitrate lyase. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.989 |
allA | MDS_1354 | MDS_0362 | MDS_1354 | Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. | Hypothetical protein. | 0.967 |
allA | MDS_1917 | MDS_0362 | MDS_1917 | Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. | Hypothetical protein. | 0.790 |
allA | MDS_2362 | MDS_0362 | MDS_2362 | Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. | Isocitrate lyase. | 0.830 |
allA | allA-2 | MDS_0362 | MDS_1918 | Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. | Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. | 0.904 |
allA | gcl | MDS_0362 | MDS_1908 | Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. | Glyoxylate carboligase; Belongs to the TPP enzyme family. | 0.863 |
allA | glcB | MDS_0362 | MDS_0213 | Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.815 |
allA | uraD | MDS_0362 | MDS_1919 | Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. | Hypothetical protein. | 0.731 |
allA | ureA | MDS_0362 | MDS_0781 | Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. | Urease subunit gamma; Belongs to the urease gamma subunit family. | 0.901 |
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