Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_1956 | MDS_1980 | MDS_1956 | MDS_1980 | Prephenate dehydratase. | Aromatic amino acid aminotransferase. | 0.951 |
MDS_1956 | MDS_3413 | MDS_1956 | MDS_3413 | Prephenate dehydratase. | Aromatic amino acid aminotransferase. | 0.951 |
MDS_1956 | MDS_4145 | MDS_1956 | MDS_4145 | Prephenate dehydratase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.463 |
MDS_1956 | aroA | MDS_1956 | MDS_1958 | Prephenate dehydratase. | Bifunctional cyclohexadienyl dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.999 |
MDS_1956 | hisB | MDS_1956 | MDS_4588 | Prephenate dehydratase. | Imidazoleglycerol-phosphate dehydratase. | 0.670 |
MDS_1956 | hisC-2 | MDS_1956 | MDS_1957 | Prephenate dehydratase. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.978 |
MDS_1956 | hisD | MDS_1956 | MDS_0973 | Prephenate dehydratase. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.595 |
MDS_1956 | hisF | MDS_1956 | MDS_4584 | Prephenate dehydratase. | Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.640 |
MDS_1956 | hisH | MDS_1956 | MDS_4587 | Prephenate dehydratase. | Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | 0.594 |
MDS_1956 | hisI | MDS_1956 | MDS_0558 | Prephenate dehydratase. | phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.515 |
MDS_1980 | MDS_1956 | MDS_1980 | MDS_1956 | Aromatic amino acid aminotransferase. | Prephenate dehydratase. | 0.951 |
MDS_1980 | MDS_3413 | MDS_1980 | MDS_3413 | Aromatic amino acid aminotransferase. | Aromatic amino acid aminotransferase. | 0.907 |
MDS_1980 | MDS_4145 | MDS_1980 | MDS_4145 | Aromatic amino acid aminotransferase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.948 |
MDS_1980 | aroA | MDS_1980 | MDS_1958 | Aromatic amino acid aminotransferase. | Bifunctional cyclohexadienyl dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.949 |
MDS_1980 | hisC-2 | MDS_1980 | MDS_1957 | Aromatic amino acid aminotransferase. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.915 |
MDS_3413 | MDS_1956 | MDS_3413 | MDS_1956 | Aromatic amino acid aminotransferase. | Prephenate dehydratase. | 0.951 |
MDS_3413 | MDS_1980 | MDS_3413 | MDS_1980 | Aromatic amino acid aminotransferase. | Aromatic amino acid aminotransferase. | 0.907 |
MDS_3413 | MDS_4145 | MDS_3413 | MDS_4145 | Aromatic amino acid aminotransferase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.948 |
MDS_3413 | aroA | MDS_3413 | MDS_1958 | Aromatic amino acid aminotransferase. | Bifunctional cyclohexadienyl dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.949 |
MDS_3413 | hisC-2 | MDS_3413 | MDS_1957 | Aromatic amino acid aminotransferase. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.915 |
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