Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_1416 | MDS_1836 | MDS_1416 | MDS_1836 | Hypothetical protein. | Aminotransferase. | 0.460 |
MDS_1416 | MDS_1963 | MDS_1416 | MDS_1963 | Hypothetical protein. | UDP-N-acetylglucosamine 2-epimerase. | 0.687 |
MDS_1416 | MDS_1965 | MDS_1416 | MDS_1965 | Hypothetical protein. | Udpglucose 6-dehydrogenase. | 0.822 |
MDS_1416 | MDS_1967 | MDS_1416 | MDS_1967 | Hypothetical protein. | Aminotransferase WbpE. | 0.460 |
MDS_1416 | MDS_1978 | MDS_1416 | MDS_1978 | Hypothetical protein. | Glycosyl transferase family protein. | 0.554 |
MDS_1836 | MDS_1416 | MDS_1836 | MDS_1416 | Aminotransferase. | Hypothetical protein. | 0.460 |
MDS_1836 | MDS_1963 | MDS_1836 | MDS_1963 | Aminotransferase. | UDP-N-acetylglucosamine 2-epimerase. | 0.831 |
MDS_1836 | MDS_1965 | MDS_1836 | MDS_1965 | Aminotransferase. | Udpglucose 6-dehydrogenase. | 0.869 |
MDS_1836 | MDS_1966 | MDS_1836 | MDS_1966 | Aminotransferase. | Sugar nucleotide epimerase / oxidoreductase. | 0.865 |
MDS_1836 | MDS_1977 | MDS_1836 | MDS_1977 | Aminotransferase. | Putative group 1 glycosyl transferase. | 0.858 |
MDS_1836 | MDS_1978 | MDS_1836 | MDS_1978 | Aminotransferase. | Glycosyl transferase family protein. | 0.840 |
MDS_1963 | MDS_1416 | MDS_1963 | MDS_1416 | UDP-N-acetylglucosamine 2-epimerase. | Hypothetical protein. | 0.687 |
MDS_1963 | MDS_1836 | MDS_1963 | MDS_1836 | UDP-N-acetylglucosamine 2-epimerase. | Aminotransferase. | 0.831 |
MDS_1963 | MDS_1965 | MDS_1963 | MDS_1965 | UDP-N-acetylglucosamine 2-epimerase. | Udpglucose 6-dehydrogenase. | 0.995 |
MDS_1963 | MDS_1966 | MDS_1963 | MDS_1966 | UDP-N-acetylglucosamine 2-epimerase. | Sugar nucleotide epimerase / oxidoreductase. | 0.975 |
MDS_1963 | MDS_1967 | MDS_1963 | MDS_1967 | UDP-N-acetylglucosamine 2-epimerase. | Aminotransferase WbpE. | 0.915 |
MDS_1963 | MDS_1977 | MDS_1963 | MDS_1977 | UDP-N-acetylglucosamine 2-epimerase. | Putative group 1 glycosyl transferase. | 0.904 |
MDS_1963 | MDS_1978 | MDS_1963 | MDS_1978 | UDP-N-acetylglucosamine 2-epimerase. | Glycosyl transferase family protein. | 0.864 |
MDS_1963 | glmU | MDS_1963 | MDS_4940 | UDP-N-acetylglucosamine 2-epimerase. | Glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.937 |
MDS_1963 | lpxA | MDS_1963 | MDS_3318 | UDP-N-acetylglucosamine 2-epimerase. | UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.823 |
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