STRINGSTRING
MDS_1966 MDS_1966 MDS_1967 MDS_1967 MDS_1963 MDS_1963 MDS_1965 MDS_1965 glmU glmU murA murA MDS_1071 MDS_1071 MDS_4598 MDS_4598 MDS_1836 MDS_1836 MDS_1970 MDS_1970 MDS_1969 MDS_1969
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_1966Sugar nucleotide epimerase / oxidoreductase. (324 aa)    
Predicted Functional Partners:
MDS_1967
Aminotransferase WbpE.
 
 
 0.994
MDS_1963
UDP-N-acetylglucosamine 2-epimerase.
  
 
 0.975
MDS_1965
Udpglucose 6-dehydrogenase.
  
 
 0.973
glmU
Glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
    
 0.929
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
 0.915
MDS_1071
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.876
MDS_4598
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.876
MDS_1836
Aminotransferase.
 
  
 0.865
MDS_1970
Sialic acid synthase.
 
  
 0.858
MDS_1969
Spore coat polysaccharide biosynthesis protein, glycosyltransferase.
 
   
 0.841
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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