STRINGSTRING
MDS_1976 MDS_1976 MDS_1977 MDS_1977 MDS_1965 MDS_1965 MDS_1082 MDS_1082 MDS_2417 MDS_2417 MDS_1964 MDS_1964 glgB glgB treZ treZ MDS_1792 MDS_1792 MDS_3692 MDS_3692 MDS_1835 MDS_1835
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_1976Glycosyl transferase group 1. (398 aa)    
Predicted Functional Partners:
MDS_1977
Putative group 1 glycosyl transferase.
 
     0.878
MDS_1965
Udpglucose 6-dehydrogenase.
 
  
 0.770
MDS_1082
GDP-mannose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.710
MDS_2417
UDP-glucose 6-dehydrogenase.
 
  
 0.695
MDS_1964
Nucleotide sugar dehydrogenase.
 
  
 0.693
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.632
treZ
Malto-oligosyltrehalose trehalohydrolase.
   
 0.632
MDS_1792
Amino acid adenylation domain-containing protein.
  
 
 0.599
MDS_3692
Alpha/beta fold family hydrolase-like protein.
   
 
 0.573
MDS_1835
WxcM-like protein.
 
  
 0.554
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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