STRINGSTRING
MDS_2035 MDS_2035 MDS_2034 MDS_2034 MDS_0748 MDS_0748 MDS_1657 MDS_1657 MDS_4542 MDS_4542 MDS_2033 MDS_2033 MDS_2936 MDS_2936 MDS_2036 MDS_2036 MDS_2037 MDS_2037 MDS_2031 MDS_2031 MDS_3947 MDS_3947
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_2035Ethanolamine ammonia lyase large subunit. (515 aa)    
Predicted Functional Partners:
MDS_2034
Ethanolamine ammonia-lyase light chain; Belongs to the EutC family.
 
 0.999
MDS_0748
Glycerophosphodiester phosphodiesterase.
     
  0.900
MDS_1657
Glycerophosphoryl diester phosphodiesterase.
     
  0.900
MDS_4542
Glycerophosphoryl diester phosphodiesterase.
     
  0.900
MDS_2033
Hypothetical protein.
       0.651
MDS_2936
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.633
MDS_2036
Putative two-component sensor.
       0.562
MDS_2037
Putative two-component response regulator.
       0.562
MDS_2031
Abortive infection protein.
       0.471
MDS_3947
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.433
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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